Author Archives: Mo

What Are You Waiting For- A Certain Shade of Green? Core Science & Tech Development

Solving difficult scientific or engineering problems has proven itself to be the greatest benefactor of long-term growth and development. However, finding support for fundamental technological developments has come increasingly under fire in recent years. It is not just crying wolf, and we have all … Continue reading

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Filed under Genomics, BigPharma

K-Mistry Typeface By Ranmalee Jayaratne

I wanted to take a moment to thank Ranmalee for her wonderful concept and execution of the K-mistry type face in the banner for this site.  It is refreshing to see young designers take on the difficult challenge of presenting … Continue reading

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Filed under Uncategorized

Closing The Gap Between Computational & Pharmaceutical Innovation

When confronted with the mortality of life, it becomes painfully clear that medicine has not been able to keep up with information and computational innovations. At the heart of the problem stands  the drug development process, where an average of … Continue reading

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Filed under BigPharma, Genomics

Chaos Game Analysis of Genomes

Genomic code that makes us is made up of four letters, ATGC. Billions of these letters together creates a lifeform. Iterated function systems (IFS) are anything that can be made by repeating the same simple rules over and over. The … Continue reading

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Filed under Fractals, Genomics

Bioinformatics In Bengal

Visiting Bengal for the holidays I didn’t expect a thriving bioinformatics community. Yet, that’s exactly what I found when Dr. Haseena Khan invited me to visit her lab at The University of Dhaka. The Jute Genome Project was a consortium … Continue reading

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Filed under Genomics, Microbiology

Cancer, Stress, Genomic Treatments & Steve Jobs

Of the billions of letters making up our life-code a few simple mistakes can cause a cell to stop following the rules, multiply endlessly and destroy it’s host eco-system, you. What can introduce such mistakes in our DNA? The riskiest … Continue reading

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Filed under Genomics, Meditation, Neuroscience

Zero-mode Waveguide & Single Molecule Real Time Sequencing

Last week saw something of a historic announcement that may well be seen in grander light by our offspring than us. 23 & Me announced the $999 Exome, all the protein coding regions of our genome. This for the first … Continue reading

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Filed under Genomics

Drug Development from Binary to Gradient Model

Earlier this year a study by the Center for the Study of Drug Development at Tufts University placed the cost of developing a new drug at $1.3 billion [1]. Though the number is contested by other researchers [2], it is well within … Continue reading

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Filed under BigPharma, Genomics

The Fall in Gov Funding & Rise of Privatization in Genome Databases

As the spaceshuttle program comes to an end we are reminded of the role of goverments in birthing industries. And just like the manned space program, genomics has been mostly government funded and just like the space program it’s about … Continue reading

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Filed under Genomics

SHDH45@Google: simple BLAST+ setup

Super Happy Dev House pays off once again, with a day that blurred the line between play and work. Reminiscent of the days in middle and high school where my parents would provide tables, power cords and snacks for those all night … Continue reading

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Filed under Genomics